SNP Profiles of BE 10 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
1._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
2._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
3._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
4._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
5._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
6._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
7._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
8._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
9._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
10._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
11._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
12._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
13._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
14._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
15._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
16._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
17._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
18._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
19._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
20._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
21._GC-08-090-2-13	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
22._GC-08-090-2-13	TT	AA	GG	CC	CC	_	CC	TT	AA	AA	CC	GG	TT	AA
23._BE_10	TT	AA	GG	CC	CC	_	CC	TT	AA	AA	CC	GG	TT	AA
24._BE_10	TT	AA	GG	CC	CC	TT	CC	TT	AA	AA	CC	GG	TT	AA
25._GC-08-90-2-13	AA	AA	CC	GG	GG	AA	_	_	AA	AA	GG	GG	AA	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	GG	GG	AA	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
1._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
2._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
3._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
4._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
5._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
6._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
7._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
8._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
9._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
10._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
11._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
12._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
13._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
14._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
15._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
16._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
17._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
18._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
19._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
20._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
21._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
22._GC-08-090-2-13	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
23._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
24._BE_10	CC	GG	GG	GG	TT	AA	CC	TT	TT	AA	GG	AA	AA	CC
25._GC-08-90-2-13	GG	CC	CC	_	AA	AA	CC	AA	_	_	GG	AA	AA	GG

	29	30	31	32	33	34
_Input profile	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
19._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
20._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
21._GC-08-090-2-13	AA	_	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
22._GC-08-090-2-13	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
23._BE_10	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
24._BE_10	AA	_	TT	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
25._GC-08-90-2-13	AA	GG	AA	CC	TT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: BE_10

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5A N3/467 T1

Dapeng Zhang, 2016

1._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 6

Dapeng Zhang, 2016

2._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

3._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

4._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

5._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

6._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

7._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

8._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

9._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

10._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

11._BE_10 GC-08-090-2-13

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

12._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 5

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

13._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 7

Dapeng Zhang, 2016

14._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 8

Dapeng Zhang, 2016

15._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 9

Dapeng Zhang, 2016

16._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 11

Dapeng Zhang, 2016

17._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 13

Dapeng Zhang, 2016

18._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 14

Dapeng Zhang, 2016

19._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 1 > FP

Dapeng Zhang, 2016

20._BE_10

97.1 %
34 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 4 > FP

Dapeng Zhang, 2016

21._BE_10 GC-08-090-2-13

97 %
33 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP4

22._BE_10 GC-08-090-2-13

97 %
33 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

23._BE_10

97 %
33 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 2 > FP

Dapeng Zhang, 2016

24._BE_10

97 %
33 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8213 3 > FP

Dapeng Zhang, 2016

25._BE_10 GC-08-90-2-13

48.3 %
29 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: Nursery, Block: -, Rep: -, Tree: 5

Notes: MCCS_Structure_refs_above_0.9membership - Sample

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1270
6	TcSNP1253	7	TcSNP1165	8	TcSNP1144	9	TcSNP1075	10	TcSNP1062
11	TcSNP1060	12	TcSNP998	13	TcSNP994	14	TcSNP953	15	TcSNP891
16	TcSNP872	17	TcSNP723	18	TcSNP645	19	TcSNP619	20	TcSNP591
21	TcSNP577	22	TcSNP560	23	TcSNP534	24	TcSNP469	25	TcSNP429
26	TcSNP372	27	TcSNP230	28	TcSNP226	29	TcSNP193	30	TcSNP151
31	TcSNP150	32	TcSNP144	33	TcSNP32	34	TcSNP25